PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do023900.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 379aa    MW: 40467.9 Da    PI: 6.6546
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do023900.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.21.2e-10183241563
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 kr++r   NR +A rs +RK  +i+eLe+kv++L++e ++L  +l  l+     l+se+
  Do023900.1 183 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLALLQRDTTGLTSEN 241
                 9***********************************************99998888887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.4E-17179243IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.921181244IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-9183238No hitNo description
PfamPF001702.9E-9183241IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.04E-11183235No hitNo description
CDDcd147037.86E-23184233No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MNKDKAPMQG DGSSGAGLPP PATPPAGAPP SSSTRPPECD ISRMSDVPTR NAGHRRAHSE  60
ILSLPDDLDL SAAGGGDGPS LSDENDEELF SMFLDVDKLN SSCGASSEAE AESSSAAGGG  120
GEGVELGHAP RPRHQHSQSM DESMSMKAEQ LVGAPGMEGM SSAEAKKAVS AAKLAELALV  180
DPKRAKRIWA NRQSAARSKE RKMRYIAELE RKVQTLQTEA TTLSAQLALL QRDTTGLTSE  240
NSELKIRLQT MEQQVHLQDA LNDTLKSEVQ RLKVATGQVS NGGGGMMMNF GAMPRPFGGN  300
QQMFHNNQAM QSMLATQQXQ QLQLHSQPQQ QALHPQHQQQ PLHPLQAQQL QQAARDLKMK  360
GHLGSQGQWG DGKSGSSGS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9599490.0EU959949.1 Zea mays clone 220819 transcription factor RF2a mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004957354.10.0PREDICTED: transcription factor RF2a-like
RefseqXP_004957355.10.0PREDICTED: transcription factor RF2a-like
SwissprotQ69IL41e-155RF2A_ORYSJ; Transcription factor RF2a
TrEMBLK3ZUA10.0K3ZUA1_SETIT; Uncharacterized protein
STRINGSi030182m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP42693868
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.19e-59bZIP family protein